Transcript: ENSDART00000007842.9 isoc2-201

Description

isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 645 variant alleles and maps to 246 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007842.9	isoc2-201	912	197aa	ENSDARP00000022030.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JME6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000178291.2	isoc2-203	936	197aa	ENSDARP00000143811.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JME6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146997.2	isoc2-202	863	176aa	ENSDARP00000117854.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 912 bps, Translation length: 197 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0JME6

Version

ENSDART00000007842.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.