Transcript: ENSDART00000007806.9 zbtb16a-201

Description

zinc finger and BTB domain containing 16a [Source:ZFIN;Acc:ZDB-GENE-030131-1989]

Gene Synonyms

plzfa, wu:fb93g12, wu:fc07c10, zbtb16, zgc:55675

Location

Chromosome 21: 23,159,385-23,331,619 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 55 domains and features, is associated with 1784 variant alleles and maps to 347 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000007184.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000184419.1	zbtb16a-205	7441	671aa	ENSDARP00000153802.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000007806.9	zbtb16a-201	7407	670aa	ENSDARP00000024790.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FDS7	APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000181815.1	zbtb16a-204	2074	671aa	ENSDARP00000157661.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT1: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that is conserved in at least three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT1,
ENSDART00000140284.3	zbtb16a-203	1485	420aa	ENSDARP00000115504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134103.2	zbtb16a-202	1445	420aa	ENSDARP00000122504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 7,407 bps, Translation length: 670 residues

Version

ENSDART00000007806.9

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000007806.9 zbtb16a-201

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Transcript: ENSDART00000007806.9 zbtb16a-201

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