Transcript: ENSDART00000007726.10 sgf29-201

Description

SAGA complex associated factor 29 [Source:ZFIN;Acc:ZDB-GENE-041010-62]

Gene Synonyms

ccdc101, zgc:103544

Location

About this transcript

This transcript has 10 exons, is annotated with 7 domains and features, is associated with 177 variant alleles and maps to 179 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007726.10	sgf29-201	1359	293aa	ENSDARP00000002714.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QQW7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144369.3	sgf29-203	867	213aa	ENSDARP00000114577.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QF09	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000124063.3	sgf29-202	769	177aa	ENSDARP00000107940.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QD08	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 1,359 bps, Translation length: 293 residues

Version

ENSDART00000007726.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.