Transcript: ENSDART00000007700.9 atf6-201

Description

activating transcription factor 6 [Source:ZFIN;Acc:ZDB-GENE-041014-328]

Location

About this transcript

This transcript has 16 exons, is annotated with 20 domains and features, is associated with 1586 variant alleles and maps to 252 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007700.9	atf6-201	4192	653aa	ENSDARP00000009333.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RH85	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153018.2	atf6-202	937	284aa	ENSDARP00000127124.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 4,192 bps, Translation length: 653 residues

Version

ENSDART00000007700.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.