Transcript: ENSDART00000007640.10 PTCH1-202

Description

patched 1 [Source:ZFIN;Acc:ZDB-GENE-980526-196]

Location

About this transcript

This transcript has 24 exons, is annotated with 66 domains and features, is associated with 2503 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000007640.10	PTCH1-202	4834	1475aa	ENSDARP00000025418.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8E2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148258.2	PTCH1-201	4068	1355aa	ENSDARP00000114906.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 24, Coding exons: 23, Transcript length: 4,834 bps, Translation length: 1,475 residues

Version

ENSDART00000007640.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.