Transcript: ENSDART00000006998.10 slitrk4-201

Description

SLIT and NTRK-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-140303-1]

Location

About this transcript

This transcript has 3 exons, is annotated with 47 domains and features, is associated with 54 variant alleles and maps to 103 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166730.2	slitrk4-202	4819	830aa	ENSDARP00000141891.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYE6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000006998.10	slitrk4-201	3472	769aa	ENSDARP00000022100.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QKW6	-
ENSDART00000182381.1	slitrk4-203	2493	830aa	ENSDARP00000149841.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IYE6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 3,472 bps, Translation length: 769 residues

Version

ENSDART00000006998.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]