Transcript: ENSDART00000006549.8 pif1-201

Description

PIF1 5'-to-3' DNA helicase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-4928]

Gene Synonyms

PIF1 homolog, cb934, fe11d03, wu:fe11d03, zgc:56161

Location

About this transcript

This transcript has 13 exons, is annotated with 12 domains and features, is associated with 476 variant alleles and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000006549.8	pif1-201	2455	639aa	ENSDARP00000022087.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000190488.1	pif1-203	3784	647aa	ENSDARP00000154753.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
ENSDART00000136207.2	pif1-202	954	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,455 bps, Translation length: 639 residues

Version

ENSDART00000006549.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.