Transcript: ENSDART00000006463.7 PHF6-202

Description

PHD finger protein 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5278]

Location

Chromosome 14: 31,493,119-31,507,744 forward strand.

About this transcript

This transcript has 11 exons, is annotated with 17 domains and features, is associated with 193 variant alleles and maps to 237 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004046.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000006463.7	PHF6-202	1920	363aa	ENSDARP00000023828.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170683.2	PHF6-205	1123	363aa	ENSDARP00000137488.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173281.2	PHF6-204	926	195aa	ENSDARP00000142508.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000138341.2	PHF6-203	884	267aa	ENSDARP00000119583.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000172945.2	PHF6-201	810	241aa	ENSDARP00000142214.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 9, Transcript length: 1,920 bps, Translation length: 363 residues

Version

ENSDART00000006463.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000006463.7 PHF6-202

Summary

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Transcript: ENSDART00000006463.7 PHF6-202

Summary

About Us

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