Transcript: ENSDART00000006412.11 pde11al-201

Description

phosphodiesterase 11a, like [Source:ZFIN;Acc:ZDB-GENE-031118-106]

Gene Synonyms

pde11a, wu:ft39g12

Location

About this transcript

This transcript has 20 exons, is annotated with 29 domains and features, is associated with 607 variant alleles and maps to 127 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000006412.11	pde11al-201	2993	920aa	ENSDARP00000027114.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QJD6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000133403.2	pde11al-202	1347	449aa	ENSDARP00000119965.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R7S4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000143567.2	pde11al-203	883	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,993 bps, Translation length: 920 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000006412.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.