Transcript: ENSDART00000005883.9 JAGN1-201

Description

jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]

Location

About this transcript

This transcript has 3 exons, is annotated with 15 domains and features, is associated with 192 variant alleles and maps to 137 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005883.9	JAGN1-201	1615	183aa	ENSDARP00000012395.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L864	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189538.1	JAGN1-202	4369	183aa	ENSDARP00000145861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1L864	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 1,615 bps, Translation length: 183 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1L864

Version

ENSDART00000005883.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.