Transcript: ENSDART00000005847.9 NAV3-201

Description

neuron navigator 3 [Source:ZFIN;Acc:ZDB-GENE-021205-1]

Location

About this transcript

This transcript has 37 exons, is annotated with 84 domains and features, is associated with 1965 variant alleles and maps to 303 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005847.9	NAV3-201	7659	2269aa	ENSDARP00000021413.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5TZ18	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000036886.6	NAV3-203	1938	527aa	ENSDARP00000028470.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000143674.2	NAV3-202	522	116aa	ENSDARP00000114635.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 37, Coding exons: 37, Transcript length: 7,659 bps, Translation length: 2,269 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5TZ18

Version

ENSDART00000005847.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.