Transcript: ENSDART00000005638.11 stxbp1b-201

Description

syntaxin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060531-166]

Gene Synonyms

si:rp71-10d23.3

Location

About this transcript

This transcript has 20 exons, is annotated with 11 domains and features, is associated with 804 variant alleles and maps to 401 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005638.11	stxbp1b-201	4713	605aa	ENSDARP00000026241.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BGE0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193274.1	stxbp1b-202	5245	605aa	ENSDARP00000144839.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2BGE0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 20, Coding exons: 19, Transcript length: 4,713 bps, Translation length: 605 residues

Version

ENSDART00000005638.11

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.