Transcript: ENSDART00000005464.8 rer1-201

Description

retention in endoplasmic reticulum sorting receptor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1494]

Gene Synonyms

zgc:65968

Location

Chromosome 8: 48,942,470-48,959,607 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 16 domains and features, is associated with 425 variant alleles and maps to 344 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000012747.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005464.8	rer1-201	2222	196aa	ENSDARP00000007832.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PE45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184742.1	rer1-204	2906	196aa	ENSDARP00000156459.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PE45	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000180763.1	rer1-203	1243	196aa	ENSDARP00000155364.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PE45	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132035.2	rer1-202	1154	196aa	ENSDARP00000121288.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PE45	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 2,222 bps, Translation length: 196 residues

Version

ENSDART00000005464.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

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Transcript: ENSDART00000005464.8 rer1-201

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Transcript: ENSDART00000005464.8 rer1-201

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