Transcript: ENSDART00000005033.10 cmtm3-201

Description

CKLF-like MARVEL transmembrane domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040801-206]

Gene Synonyms

zgc:91863

Location

About this transcript

This transcript has 5 exons, is annotated with 12 domains and features, is associated with 297 variant alleles and maps to 212 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000005033.10	cmtm3-201	1705	170aa	ENSDARP00000016900.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DEF8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149981.2	cmtm3-202	780	148aa	ENSDARP00000142681.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NS71	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,705 bps, Translation length: 170 residues

Version

ENSDART00000005033.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]