Transcript: ENSDART00000004238.9 rpl7a-201

Description

ribosomal protein L7a [Source:ZFIN;Acc:ZDB-GENE-031001-9]

Gene Synonyms

wu:fa95b03, zgc:73183, zgc:86667

Location

Chromosome 5: 33,284,144-33,287,691 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 21 domains and features, is associated with 318 variant alleles and maps to 160 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000019230.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004238.9	rpl7a-201	969	266aa	ENSDARP00000010055.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PBZ1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184426.1	rpl7a-205	820	266aa	ENSDARP00000151111.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137988.3	rpl7a-204	816	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000132525.2	rpl7a-202	750	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000137409.3	rpl7a-203	692	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 969 bps, Translation length: 266 residues

Version

ENSDART00000004238.9

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000004238.9 rpl7a-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000004238.9 rpl7a-201

Summary

About Us

Get help

Our sister sites

Follow us