Transcript: ENSDART00000004122.11 PTPRE-201

Description

protein tyrosine phosphatase receptor type Ea [Source:ZFIN;Acc:ZDB-GENE-100714-1]

Location

About this transcript

This transcript has 19 exons, is annotated with 38 domains and features, is associated with 1219 variant alleles and maps to 160 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000169949.2	PTPRE-204	2091	696aa	ENSDARP00000129900.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000004122.11	PTPRE-201	5539	681aa	ENSDARP00000015855.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EZG7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182723.1	PTPRE-202	5454	641aa	ENSDARP00000155450.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000192266.1	PTPRE-206	5391	620aa	ENSDARP00000153481.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000191641.1	PTPRE-205	2483	594aa	ENSDARP00000154934.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000182226.1	PTPRE-203	2402	587aa	ENSDARP00000155372.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 19, Coding exons: 19, Transcript length: 5,539 bps, Translation length: 681 residues

Version

ENSDART00000004122.11

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.