Transcript: ENSDART00000004031.10 hacl1-201

Description

2-hydroxyacyl-CoA lyase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2058]

Gene Synonyms

phyh2, wu:fd42e11, zgc:76920

Location

About this transcript

This transcript has 17 exons, is annotated with 16 domains and features, is associated with 642 variant alleles and maps to 195 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000004031.10	hacl1-201	2494	568aa	ENSDARP00000005715.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RB36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143898.2	hacl1-202	473	71aa	ENSDARP00000123780.1	Nonsense mediated decay	F8W559	-

Summary

Statistics

Exons: 17, Coding exons: 17, Transcript length: 2,494 bps, Translation length: 568 residues

Version

ENSDART00000004031.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.