Transcript: ENSDART00000003922.8 erlin1-201

Description

ER lipid raft associated 1 [Source:ZFIN;Acc:ZDB-GENE-050327-13]

Gene Synonyms

fa10h05, fb19h05, wu:fa10h05, wu:fb19h05, zgc:110547

Location

About this transcript

This transcript has 12 exons, is annotated with 15 domains and features, is associated with 27 variant alleles and maps to 176 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003922.8	erlin1-201	3706	342aa	ENSDARP00000015815.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EG2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000172156.2	erlin1-203	4419	342aa	ENSDARP00000140094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q58EG2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000137934.2	erlin1-202	967	251aa	ENSDARP00000112673.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 3,706 bps, Translation length: 342 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q58EG2

Version

ENSDART00000003922.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.