Transcript: ENSDART00000003790.7 pwp1-201

Description

PWP1 homolog, endonuclein [Source:ZFIN;Acc:ZDB-GENE-040426-1049]

Gene Synonyms

zgc:56486

Location

About this transcript

This transcript has 15 exons, is annotated with 27 domains and features, is associated with 479 variant alleles and maps to 142 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000003790.7	pwp1-201	1990	490aa	ENSDARP00000003237.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZWE1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189215.1	pwp1-203	3416	521aa	ENSDARP00000148873.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139376.2	pwp1-202	962	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,990 bps, Translation length: 490 residues

Version

ENSDART00000003790.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.