Transcript: ENSDART00000003303.8 rnf13-201

Description

ring finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-040426-772]

Gene Synonyms

wu:fj82g10, zgc:55660, zgc:77194

Location

About this transcript

This transcript has 10 exons, is annotated with 18 domains and features, is associated with 736 variant alleles and maps to 261 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000130581.3	rnf13-202	1968	377aa	ENSDARP00000141254.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32TEQ5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000003303.8	rnf13-201	4631	263aa	ENSDARP00000141604.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000131952.3	rnf13-203	671	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 4,631 bps, Translation length: 263 residues

Version

ENSDART00000003303.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.