Transcript: ENSDART00000003076.10 usp28-201

Description

ubiquitin specific peptidase 28 [Source:ZFIN;Acc:ZDB-GENE-041008-142]

Gene Synonyms

im:7138195

Location

Chromosome 21: 23,050,310-23,110,930 reverse strand.

About this transcript

This transcript has 25 exons, is annotated with 30 domains and features, is associated with 783 variant alleles and maps to 150 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008880.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000190386.1	usp28-204	4893	1223aa	ENSDARP00000150612.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000184925.1	usp28-203	4821	1199aa	ENSDARP00000150990.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000003076.10	usp28-201	4785	1187aa	ENSDARP00000012821.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000147896.2	usp28-202	3653	1041aa	ENSDARP00000123445.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 4,785 bps, Translation length: 1,187 residues

Version

ENSDART00000003076.10

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000003076.10 usp28-201

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Transcript: ENSDART00000003076.10 usp28-201

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