Transcript: ENSDART00000002961.7 rcor2-201

Description

REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]

Gene Synonyms

zgc:77264

Location

Chromosome 7: 24,979,833-24,994,568 reverse strand.

About this transcript

This transcript has 13 exons, is annotated with 33 domains and features, is associated with 420 variant alleles and maps to 224 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000008278.9 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002961.7	rcor2-201	2860	536aa	ENSDARP00000026854.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P116	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131671.3	rcor2-202	1017	171aa	ENSDARP00000142842.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173955.2	rcor2-204	688	195aa	ENSDARP00000142915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000173791.2	rcor2-203	641	180aa	ENSDARP00000142777.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000174002.2	rcor2-205	655	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 12, Transcript length: 2,860 bps, Translation length: 536 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6P116

Version

ENSDART00000002961.7

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Upcoming Ensembl Platform Transition

Transcript: ENSDART00000002961.7 rcor2-201

Summary

About Us

Get help

Our sister sites

Follow us

Upcoming Ensembl Platform Transition

Favourite species

All species

Recent locations

Transcript: ENSDART00000002961.7 rcor2-201

Summary

About Us

Get help

Our sister sites

Follow us