Transcript: ENSDART00000002770.8 TSPAN33-201

Description

tetraspanin 33a [Source:ZFIN;Acc:ZDB-GENE-040718-361]

Location

About this transcript

This transcript has 8 exons, is annotated with 26 domains and features, is associated with 249 variant alleles and maps to 223 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002770.8	TSPAN33-201	1194	281aa	ENSDARP00000007865.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5RH71-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000111882.4	TSPAN33-203	1650	215aa	ENSDARP00000103617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000148292.2	TSPAN33-202	755	160aa	ENSDARP00000123021.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 1,194 bps, Translation length: 281 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q5RH71

Version

ENSDART00000002770.8

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.