Transcript: ENSDART00000002279.8 cdh11-201

Description

cadherin 11, type 2, OB-cadherin (osteoblast) [Source:ZFIN;Acc:ZDB-GENE-980526-170]

Gene Synonyms

cdhvn, ventral neural cadherin, vnc

Location

Chromosome 7: 43,760,149-43,840,680 reverse strand.

About this transcript

This transcript has 12 exons, is annotated with 58 domains and features, is associated with 14 variant alleles and maps to 210 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021442.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000002279.8	cdh11-201	4068	800aa	ENSDARP00000006449.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DGG4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179758.1	cdh11-203	3232	800aa	ENSDARP00000153918.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DGG4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000183602.1	cdh11-204	3225	800aa	ENSDARP00000151942.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DGG4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000174592.2	cdh11-202	2653	800aa	ENSDARP00000143868.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DGG4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 4,068 bps, Translation length: 800 residues

Version

ENSDART00000002279.8

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]

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Transcript: ENSDART00000002279.8 cdh11-201

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Transcript: ENSDART00000002279.8 cdh11-201

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