Transcript: ENSDART00000001795.9 sp3a-201

Description

sp3a transcription factor [Source:NCBI gene (formerly Entrezgene);Acc:558652]

Location

Chromosome 9: 2,762,398-2,777,286 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 33 domains and features, is associated with 335 variant alleles and maps to 190 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000001549.13 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000001795.9	sp3a-201	2868	679aa	ENSDARP00000001137.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QP61	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000177563.2	sp3a-203	2076	691aa	ENSDARP00000143885.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A286YA94	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000123342.3	sp3a-202	337	64aa	ENSDARP00000110852.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 2,868 bps, Translation length: 679 residues

Version

ENSDART00000001795.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000001795.9 sp3a-201

Summary

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Transcript: ENSDART00000001795.9 sp3a-201

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