Transcript: ENSDART00000001092.10 ncor2-201

Description

nuclear receptor corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-030616-81]

Gene Synonyms

gb:be017685, si:bz71m17.2, smrt

Location

About this transcript

This transcript has 35 exons, is annotated with 78 domains and features, is associated with 2219 variant alleles and maps to 287 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000051139.7	ncor2-202	9984	2315aa	ENSDARP00000051138.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FF48	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000001092.10	ncor2-201	6325	1999aa	ENSDARP00000001475.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8E1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000140618.3	ncor2-204	6295	1989aa	ENSDARP00000121486.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8Z8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000133292.2	ncor2-203	539	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 35, Coding exons: 35, Transcript length: 6,325 bps, Translation length: 1,999 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000001092.10

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.