Transcript: ENSDART00000000392.10 PDE6B-201

Description

phosphodiesterase 6A, cGMP-specific, rod, alpha [Source:ZFIN;Acc:ZDB-GENE-030616-42]

Location

About this transcript

This transcript has 22 exons, is annotated with 32 domains and features, is associated with 1 variant allele and maps to 199 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000000392.10	PDE6B-201	3033	858aa	ENSDARP00000000392.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q800E7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189157.1	PDE6B-203	3467	842aa	ENSDARP00000156300.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000160752.2	PDE6B-202	733	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 22, Coding exons: 22, Transcript length: 3,033 bps, Translation length: 858 residues

Version

ENSDART00000000392.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.