Transcript: ENSDART00000000160.10 THRA-202

Description

thyroid hormone receptor alpha a [Source:ZFIN;Acc:ZDB-GENE-990415-263]

Location

About this transcript

This transcript has 10 exons, is annotated with 38 domains and features, is associated with 1069 variant alleles and maps to 164 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000000160.10	THRA-202	2292	427aa	ENSDARP00000000160.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q98867-1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000151127.3	THRA-201	1470	409aa	ENSDARP00000125835.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000177021.2	THRA-205	1324	427aa	ENSDARP00000143608.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q98867-1	-
ENSDART00000151633.2	THRA-204	334	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000151575.2	THRA-203	651	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,292 bps, Translation length: 427 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q98867

Version

ENSDART00000000160.10

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.