Transcript: ENSDART00000186289.1 npas1-202

Description

neuronal PAS domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-060503-934]

Location

About this transcript

This transcript has 12 exons, is annotated with 33 domains and features, is associated with 206 variant alleles and maps to 124 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186289.1	npas1-202	3454	770aa	ENSDARP00000146804.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q2I0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000140213.3	npas1-201	5128	468aa	ENSDARP00000114846.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Protein summary