Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSDART00000144982.2 lhx8a-203

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Description

LIM homeobox 8a [Source:ZFIN;Acc:ZDB-GENE-031008-2]

Location

Chromosome 2: 11,206,317-11,208,748 forward strand.

About this transcript

This transcript has 6 exons, is annotated with 22 domains and features, is associated with 145 variant alleles and maps to 120 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000002330.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000019078.5	lhx8a-201	1508	332aa	ENSDARP00000028001.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000144982.2	lhx8a-203	1052	237aa	ENSDARP00000120611.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000132313.2	lhx8a-202	631	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Protein summary

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Protein domains for ENSDARP00000120611.1

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