Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

Configure this page

Custom tracks

Share this page

Bookmark this page

.

Transcript: ENSDART00000132823.3 smad9-202

.

Description

SMAD family member 9 [Source:ZFIN;Acc:ZDB-GENE-031014-1]

Location

Chromosome 10: 34,961,604-34,981,219 reverse strand.

About this transcript

This transcript has 8 exons, is annotated with 23 domains and features, is associated with 421 variant alleles and maps to 131 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000021938.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000170625.3	smad9-205	2691	466aa	ENSDARP00000131023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000087114.7	smad9-201	5365	330aa	ENSDARP00000081548.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132823.3	smad9-202	2359	466aa	ENSDARP00000117800.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ9	-
ENSDART00000186108.1	smad9-206	2291	466aa	ENSDARP00000148074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QXZ9	-
ENSDART00000145509.2	smad9-204	917	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000138281.2	smad9-203	526	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Protein summary

.

Protein domains for ENSDARP00000117800.1

.