Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSDART00000104476.3 SNX9-202

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Description

sorting nexin 9a [Source:ZFIN;Acc:ZDB-GENE-030616-66]

Location

Chromosome 17: 33,158,350-33,201,840 forward strand.

About this transcript

This transcript has 18 exons, is annotated with 20 domains and features, is associated with 1238 variant alleles and maps to 193 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000000837.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104476.3	SNX9-202	2903	562aa	ENSDARP00000095249.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZZB1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000142672.2	SNX9-201	793	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000098593.5	SNX9-203	847	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Protein summary

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Protein domains for ENSDARP00000095249.2

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