Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSDART00000063420.7 si:rp71-1i20.2-201

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Description

si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]

Location

Chromosome 22: 6,393,227-6,404,906 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 10 domains and features, is associated with 323 variant alleles and maps to 156 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000043198.8 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000063420.7	si:rp71-1i20.2-201	1652	262aa	ENSDARP00000063419.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000149399.2	si:rp71-1i20.2-203	1361	262aa	ENSDARP00000123926.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A8DZ56	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000145166.2	si:rp71-1i20.2-202	541	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Protein summary

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Protein domains for ENSDARP00000063419.5

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