Summary
Sequence
Protein Information
- Protein summary
- Domains & features
- Variants
- PDB 3D protein model
- AlphaFold predicted model
Genetic Variation
- Variant table
- Variant image
- Population comparison
- Comparison image
External References
- General identifiers
- Oligo probes
Supporting evidence
ID History
- Transcript history
- Protein history

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Transcript: ENSDART00000061588.6 PRRX1-201

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Description

paired related homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-9033]

Location

Chromosome 20: 34,511,678-34,521,041 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 15 domains and features, is associated with 319 variant alleles and maps to 257 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000042027.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000061588.6	PRRX1-201	2766	245aa	ENSDARP00000061587.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6P295	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131637.2	PRRX1-202	943	212aa	ENSDARP00000115613.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Protein summary

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Protein domains for ENSDARP00000061587.4

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