Transcript: ENSDART00000020156.8 pax1a-201

Description

paired box 1a [Source:ZFIN;Acc:ZDB-GENE-070112-182]

Gene Synonyms

zgc:158781

Location

About this transcript

This transcript has 4 exons, is annotated with 18 domains and features, is associated with 22 variant alleles and maps to 130 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000020156.8	pax1a-201	1601	359aa	ENSDARP00000023546.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QRF4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000134377.3	pax1a-202	1401	354aa	ENSDARP00000116456.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QBN7	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Protein summary