Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: prdm10 ENSDARG00000104251

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Description

PR domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-050419-74]

Location

Chromosome 18: 44,320,014-44,359,726 reverse strand.

GRCz11:CM002902.2

About this gene

This gene has 3 transcripts (splice variants), 196 orthologues and 50 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166935.2	prdm10-201	5489	1176aa	ENSDARP00000131406.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IF41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193084.1	prdm10-203	5967	1176aa	ENSDARP00000147244.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IF41	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000168619.2	prdm10-202	723	228aa	ENSDARP00000141992.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

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Summary

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