Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: ITGA4 ENSDARG00000103056

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Description

integrin subunit alpha 4 [Source:HGNC Symbol;Acc:HGNC:6140]

Location

Chromosome 9: 44,034,790-44,088,067 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 3 transcripts (splice variants), 225 orthologues, 24 paralogues and is associated with 11 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000166110.2	ITGA4-203	3388	1018aa	ENSDARP00000131563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICS1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000176954.2	ITGA4-202	3272	1018aa	ENSDARP00000144215.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4ICS1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162406.2	ITGA4-201	2270	713aa	ENSDARP00000141779.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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