Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: hoxc11b ENSDARG00000102631

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Description

homeobox C11b [Source:ZFIN;Acc:ZDB-GENE-000822-3]

Gene Synonyms

Hoxa11, im:7165141

Location

Chromosome 11: 2,180,072-2,185,174 forward strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 112 orthologues and 53 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000186854.1	hoxc11b-202	4372	306aa	ENSDARP00000156809.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDM3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000164839.3	hoxc11b-201	2649	306aa	ENSDARP00000131152.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IDM3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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