Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Molecular function
- GO: Cellular component
- GO: Biological process
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: opn6a ENSDARG00000102430

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Description

opsin 6, group member a [Source:ZFIN;Acc:ZDB-GENE-061201-30]

Location

Chromosome 11: 44,858,979-44,876,005 reverse strand.

GRCz11:CM002895.2

About this gene

This gene has 2 transcripts (splice variants), 91 orthologues and 40 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000192006.1	opn6a-202	5019	419aa	ENSDARP00000156907.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0PJR8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160465.3	opn6a-201	2190	419aa	ENSDARP00000132491.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0PJR8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

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Summary

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