Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: POLR2B ENSDARG00000098783

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Description

RNA polymerase II subunit B [Source:ZFIN;Acc:ZDB-GENE-041008-1]

Location

Chromosome 14: 52,377,557-52,408,817 reverse strand.

GRCz11:CM002898.2

About this gene

This gene has 5 transcripts (splice variants), 220 orthologues, 3 paralogues and is associated with 5 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000160293.2	POLR2B-202	1345	366aa	ENSDARP00000137138.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000167045.3	POLR2B-205	6508	1174aa	ENSDARP00000142035.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1N6S0	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162719.2	POLR2B-203	1764	562aa	ENSDARP00000137902.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000167276.2	POLR2B-204	823	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157647.2	POLR2B-201	360	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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