Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-195m9.3 ENSDARG00000096365

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Description

si:ch211-195m9.3 [Source:ZFIN;Acc:ZDB-GENE-120215-210]

Location

Chromosome 18: 35,128,685-35,148,310 forward strand.

GRCz11:CM002902.2

About this gene

This gene has 3 transcripts (splice variants) and 4 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000151595.2	si:ch211-195m9.3-203	2466	470aa	ENSDARP00000126095.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IT41	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000151579.3	si:ch211-195m9.3-202	954	318aa	ENSDARP00000125659.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IRZ7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, 5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151073.2	si:ch211-195m9.3-201	848	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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