Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: si:ch211-218d20.15 ENSDARG00000094660

.

Description

si:ch211-218d20.15 [Source:ZFIN;Acc:ZDB-GENE-070912-193]

Location

Chromosome 9: 34,425,728-34,429,575 forward strand.

GRCz11:CM002893.2

About this gene

This gene has 4 transcripts (splice variants) and 27 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000135147.2	si:ch211-218d20.15-201	1438	261aa	ENSDARP00000119255.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFM1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147216.3	si:ch211-218d20.15-204	1051	65aa	ENSDARP00000119499.1	Nonsense mediated decay	-	-
ENSDART00000135870.3	si:ch211-218d20.15-202	893	65aa	ENSDARP00000114084.1	Nonsense mediated decay	-	-
ENSDART00000138856.2	si:ch211-218d20.15-203	645	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

.

Summary

.

.