Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:dkey-27h10.2 ENSDARG00000094485

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Description

si:dkey-27h10.2 [Source:ZFIN;Acc:ZDB-GENE-090313-296]

Location

Chromosome 1: 35,662,474-35,695,724 reverse strand.

GRCz11:CM002885.2

About this gene

This gene has 4 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000176451.2	si:dkey-27h10.2-204	2411	307aa	ENSDARP00000143819.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P6I6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133813.4	si:dkey-27h10.2-201	1008	307aa	ENSDARP00000116761.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6P6I6	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000136157.3	si:dkey-27h10.2-202	742	223aa	ENSDARP00000115861.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q6B9	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000145291.2	si:dkey-27h10.2-203	578	188aa	ENSDARP00000118973.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A4T3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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