Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Molecular function
- GO: Biological process
- GO: Cellular component
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: si:dkeyp-82a1.1 ENSDARG00000093386

.

Description

si:dkeyp-82a1.1 [Source:ZFIN;Acc:ZDB-GENE-081105-23]

Location

Chromosome 8: 20,950,344-20,953,980 forward strand.

GRCz11:CM002892.2

About this gene

This gene has 8 transcripts (splice variants) and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000138728.2	si:dkeyp-82a1.1-203	606	139aa	ENSDARP00000114525.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QEB5	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144451.3	si:dkeyp-82a1.1-205	778	86aa	ENSDARP00000120349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC60	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000144929.3	si:dkeyp-82a1.1-207	673	108aa	ENSDARP00000118246.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QL91	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131329.3	si:dkeyp-82a1.1-201	363	79aa	ENSDARP00000115720.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QJI1	APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000136484.3	si:dkeyp-82a1.1-202	283	44aa	ENSDARP00000121617.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QFB3	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000146919.3	si:dkeyp-82a1.1-208	768	107aa	ENSDARP00000115526.1	Nonsense mediated decay	E9QG43	-
ENSDART00000144650.2	si:dkeyp-82a1.1-206	235	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000142229.2	si:dkeyp-82a1.1-204	302	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

.

Summary

.

.