Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: cxcl11.5 ENSDARG00000092423

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Description

chemokine (C-X-C motif) ligand 11, duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-060526-77]

Gene Synonyms

CXCL-chr5g, CXCL11ae, dr-chr1-CXCL11-37.1-DN, si:ch211-202a12.7

Location

Chromosome 5: 42,081,884-42,083,363 reverse strand.

GRCz11:CM002889.2

About this gene

This gene has 2 transcripts (splice variants), 100 orthologues and 8 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000162596.2	cxcl11.5-202	1266	106aa	ENSDARP00000136838.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IQ43	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135625.2	cxcl11.5-201	259	86aa	ENSDARP00000115162.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0R192	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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