Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: foxj1b ENSDARG00000088290

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Description

forkhead box J1b [Source:NCBI gene (formerly Entrezgene);Acc:494105]

Location

Chromosome 12: 20,149,305-20,157,014 forward strand.

GRCz11:CM002896.2

About this gene

This gene has 3 transcripts (splice variants), 86 orthologues, 53 paralogues and is associated with 29 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000126676.2	foxj1b-201	2316	442aa	ENSDARP00000107064.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8Z9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000181942.1	foxj1b-203	1343	442aa	ENSDARP00000145705.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8Z9	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000153327.2	foxj1b-202	828	184aa	ENSDARP00000127381.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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