Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-22k7.9 ENSDARG00000087788

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Description

si:ch211-22k7.9 [Source:ZFIN;Acc:ZDB-GENE-070424-160]

Location

Chromosome 4: 39,158,005-39,186,901 reverse strand.

GRCz11:CM002888.2

About this gene

This gene has 5 transcripts (splice variants), 146 orthologues and 372 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000133901.4	si:ch211-22k7.9-202	4041	1232aa	ENSDARP00000115194.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000179734.1	si:ch211-22k7.9-205	5814	243aa	ENSDARP00000148192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000121804.3	si:ch211-22k7.9-201	2425	628aa	ENSDARP00000106041.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QC83	-
ENSDART00000150371.3	si:ch211-22k7.9-203	1404	355aa	ENSDARP00000125274.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000150641.2	si:ch211-22k7.9-204	709	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Summary

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