Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: slco5a1b ENSDARG00000086104

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Description

solute carrier organic anion transporter family member 5A1b [Source:ZFIN;Acc:ZDB-GENE-070912-587]

Location

Chromosome 2: 42,382,472-42,415,902 reverse strand.

GRCz11:CM002886.2

About this gene

This gene has 4 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142489.3	slco5a1b-204	1312	375aa	ENSDARP00000116625.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000127136.3	slco5a1b-202	4370	549aa	ENSDARP00000109447.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7EYQ1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135529.2	slco5a1b-203	1147	382aa	ENSDARP00000121977.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000121452.3	slco5a1b-201	464	43aa	ENSDARP00000104619.2	Nonsense mediated decay	-	-

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Summary

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