Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Cellular component
- GO: Biological process
- GO: Molecular function
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: st3gal1 ENSDARG00000079654

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Description

ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]

Gene Synonyms

SIAT4-r1, st3gal1-r1, st3gal1A

Location

Chromosome 19: 4,773,710-4,793,333 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 6 transcripts (splice variants), 331 orthologues and 21 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000113088.4	st3gal1-202	966	321aa	ENSDARP00000099349.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PGY1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000146684.3	st3gal1-205	950	267aa	ENSDARP00000122090.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000110551.6	st3gal1-201	830	217aa	ENSDARP00000100150.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000147510.3	st3gal1-206	689	202aa	ENSDARP00000116656.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000141336.2	st3gal1-204	525	94aa	ENSDARP00000121292.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000135327.4	st3gal1-203	775	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

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Summary

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