Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: si:ch211-80h18.1 ENSDARG00000078522

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Description

si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]

Location

Chromosome 19: 3,086,851-3,127,290 reverse strand.

GRCz11:CM002903.2

About this gene

This gene has 5 transcripts (splice variants) and 21 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000122816.4	si:ch211-80h18.1-201	2443	638aa	ENSDARP00000107187.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5WW56	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000184800.1	si:ch211-80h18.1-205	1023	340aa	ENSDARP00000156952.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000137987.2	si:ch211-80h18.1-203	828	276aa	ENSDARP00000125937.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146928.3	si:ch211-80h18.1-204	488	40aa	ENSDARP00000126080.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134197.2	si:ch211-80h18.1-202	326	31aa	ENSDARP00000126172.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

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Summary

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